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ESR 173 Lab 10: Carbon Cycles & Climate Change For this Lab activity, you'll be exploring the simulation Carbon Cycle Lab by The Habitable Planet provided below; this lab activity is modified from the original instructions and includes additional reflection questions relevant to our course
ESR 173 Lab 10: Carbon Cycles & Climate Change
For this Lab activity, you'll be exploring the simulation Carbon Cycle Lab by The Habitable Planet provided below; this lab activity is modified from the original instructions and includes additional reflection questions relevant to our course.
After completing this Lab, you will be able to:
- Explore a simulation of carbon circulation through Earth’s systems
- Investigate the impact that fossil fuel usage and deforestation have on carbon cycling and accumulation
- Form evidence-based predictions about the impact of fossil fuel use on global climate, and on the Earth’s plants, animals, and oceans.
- Draw connections between the carbon cycle and human’s impact through industrialization and use of fossil fuels.
This lab uses a robust model of the carbon cycle to give you an intuitive sense for how carbon circulates through the atmosphere, biosphere, oceans, and crust. This model is similar to ones presented by the Intergovernmental Panel on Climate Change. It allows you to experiment with how human input to the cycle might change global outcomes to the year 2100 and beyond. One particularly relevant human impact is the increase in atmospheric CO2 levels. Between the years 1850 and 2015, atmospheric concentrations have risen from 290 parts per million (ppm) to over 400 ppm - a level higher than any known on Earth in more than 30 million years (see Unit 12 to find out how scientists measure ancient atmospheric carbon levels).
Using the simulator, you will experiment with the human factors that contribute to this rise and explore how different inputs to the carbon cycle might affect the concentrations of the greenhouse gas CO2.
Definitions:
Atmosphere: combustion of carbon-based fuel combines carbon, C, and oxygen, O2, adding CO2 to the atmosphere. CO2 is not a by-product of fossil fuel use; it's the direct product of the very reaction that releases the energy.
Biosphere (Terrestrial Plants and Soil): plants (biomass) inhale CO2 and exhale O2. When there's more CO2 available, biomass tends to breathe in more, and therefore grow more. Most scientists now believe that plants have a limited ability to increase their growth rate.
Surface ocean: The amount of gas dissolved in any liquid is proportional to the partial pressure of that gas in the vapor phase above the liquid (Henry's Law). As a result, if we increase the partial pressure of atmospheric CO2 (i.e. increase the concentration of CO2), then we force more CO2 gas to dissolve into the liquid. (In this case, the liquid is the ocean.) In addition to the CO2 dissolving into the liquid as a gas, CO2 reacts with H2O and forms bicarbonate ions (HCO3-) and carbonate ions (CO3--). This combustion of fossil fuels results in an increase in dissolved surface ocean carbon and a decrease in pH.
Deep ocean: Ocean chemistry involves mineral precipitation, and biological activity, and ocean currents transport the carbon from the surface ocean to the deep ocean over long time-scales.
Here are some tips for operating the simulation, including what the controls do. I recommend you explore the tool a bit before diving into the lab questions so you are familiar with what is possible, and what the limitations are.
Simulator Controls
Reset Button
Rewinds to beginning year. Does not re-establish original simulation parameters. For that, first select a different Lesson on the top bar, then re-select the current Lesson. Or reload the browser window.
Run Decade
Simulates the progress of the carbon cycle at its current settings for ten years.
Simulator Parameters

Change in fossil fuel use per year
Use your mouse to move the white circle knob, to set the percent change in fossil fuel use per year. Moving to the left decreases the rate and moving to the right increases it.
Note: You are increasing or decreasing fossil fuel use, not energy use. Energy use could rise while fossil fuel use falls, if energy generation changed from fossil fuels to some other form (wind, solar, biofuel, etc).
Deforestation rate per year
Use your mouse to move the white circle knob, to set the rate of deforestation per year. Note that deforestation is expressed as GT (metric gigatons) of carbon released, not as a percentage rate of increase. Realistic deforestation rates would remain less than 2 GT per year.
NONE
Clicking on this button sets fossil fuel use to zero, meaning that all energy, worldwide, suddenly switches to some energy source other than fossil fuels.
Note: NONE is different from a rate of increase of 0, in which fossil fuel use stops increasing.
Year and numbers
The year tells you where you are in the progression of the simulation. Simulation begins in 2010. The amount of carbon released from fossil fuels in the current year is listed below the year in gigatons, which is abbreviated as GT. Carbon released for a decade is shown on the smokestack.
Graph

The Atmospheric CO2 graph shows the progression of the carbon cycle and the amount of atmospheric carbon per year in parts per million, abbreviated as ppm. One part per million (ppm) means that for every million molecules in the air, one is carbon dioxide.
There are four lines on the graph: Historical, Projected, Simulated, and Goal. There is a diamond marker to highlight "Now". Each of these can be turned off by clicking their name in the legend.
Projected
This line comes from the IPCC (International Panel on Climate Change) 2013 Climate Change report (brief summary). The line shows the "business as usual" projection RCP8.5 for how atmospheric carbon would likely develop in the future. The simulation doesn't affect this line. It is included as a reference.
Simulated
This line shows atmospheric carbon dioxide calculated by running the simulator. As you change parameters, the slope and general shape of this line will change as well. This line is directly correlated to the carbon cycle illustration, and tracks the number in the middle of the sky on the right hand side, which says XXX ppm CO2.
Now
The diamond at the end of the Simulated CO2 line highlights the current simulator status.
Goal
This line refers to the goal of 550 ppm CO2, which would be twice the amount of atmospheric carbon in comparison to pre-industrial levels. The IPCC established this number as a goal in the 1990's, hoping that carbon emissions can be stabilized at this number instead of continually rising as they have done since the advent of the Industrial Revolution. That goal seeks to limit world warming to 2°C.
Simulator Illustration
All numbers refer to the amount of carbon present in that area. The plus or minus numbers show the change from the original value (in 2010). The scale is at the bottom: one grey rectangle equals 25 gigatons (GT) of carbon.
Carbon cycles in this illustration through a rough arc. Fossil fuels rise through the smokestack, into the atmosphere, and down to terrestrial plants and soil and ocean surface. From the ocean surface carbon gradually flows to the deep ocean.
The smokestack number
This number represents the human-generated fossil carbon emissions (in gigatons) released in the last decade's time step.
XXX ppm CO2
This number represents the current atmospheric carbon dioxide, based on the simulation. This number is also plotted on the Simulated CO2 line of the graph as the simulator runs.
Questions & Reflections
The Carbon Cycle - Part A
- Run the simulation to 2110 with the default settings. Note: The default setting for the increase in fossil fuel use per year is 2.5%. This rate of increase has been our recent experience for the increase in global energy use, as the world's economies ramp up and populations grow.
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Gaseous Carbon |
Ocean Water |
Fossil Fuels |
Biosphere Gaseous Carbon |
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To Year |
Atmosphere |
Ocean Surface |
Deep Ocean |
Oil and Gas |
Coal |
Soil |
Terrestrial Plants |
2010 |
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2060 |
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2110 |
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If only one half of the flora in the world existed in 2110 (perhaps due to deforestation), what do you predict the atmospheric carbon level would be ? How would you change the simulation to reflect this?
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What is the relationship between increased carbon in the ocean and increased carbon in the soil? How else might carbon be transferred to soil?
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Using the data generated by the simulation, determine the mathematical relationship between the percentage increase in fossil fuel consumption and the increase in atmospheric carbon. Is the relationship linear?
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The Carbon Cycle - Part B
In many scenarios, the atmospheric concentration of CO2 is projected to increase beyond 700 ppm by the end of the century. However, this increase in atmospheric carbon doesn't account for all of the carbon released by burning fossil fuels.
NOTE: 1 ppm of atmospheric CO2 is equivalent to 2.1 GT (Gigatons) of carbon.
- To find out where all the carbon really goes, run the simulation again, one decade at a time.
- Record the total amount of carbon in the atmosphere (the number in the sky) and other carbon sinks (terrestrial plants, soil, surface ocean, and deep ocean), as carbon moves through the system (6 points)
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Total Carbon Emissions |
Gaseous Carbon |
Ocean Water |
Fossil Fuels |
Biosphere Gaseous Carbon |
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To Year |
Smokestack |
Atmosphere |
Ocean Surface |
Deep Ocean |
Oil and Gas |
Coal |
Soil |
Terrestrial Plants |
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2010 |
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2020 |
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2030 |
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2040 |
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2050 |
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2060 |
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2070 |
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2080 |
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2090 |
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2100 |
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2110 |
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- As you record your data, keep in mind that this is a simulation of real life. Think about the questions below (3 points)
What is the relationship between an increase in total carbon concentration (the smokestack) and increased carbon in the ocean surface? How might this change marine life populations? What impact could fifty years at this level of emissions have on marine fauna? On marine flora?
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In addition to circulating through the carbon cycle, where else might excess carbon be found? In fifty years, where would you be most likely to see excess carbon?
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Which areas are most highly (and quickly) affected by an increase in carbon emissions (and increase in fossil fuel consumption)? How would these effects manifest themselves? What are the dangers/benefits to these areas?
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Expert Solution
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